Transcript: LINC01202:8

Basic information

LNCipedia transcript ID: LINC01202:8 
LNCipedia gene ID: LINC01202
RefSeq ID: NR_126372
Location (hg38): chr5:161910462-162001196
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 697 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126372; NR_126372.1
Alternative gene names: LINC01202


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -181.2212 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01202:8 yes no no no

Available literature

  1. Necsulea (2014), The evolution of lncRNA repertoires and expression patterns in tetrapods., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABRB2-2:4
4.0 lnc-GABRB2-2:4
4.1 lnc-GABRB2-2:4
5.0 lnc-GABRB2-2:4
5.1 LINC01202:3
5.2 LINC01202:8