Transcript: LINC01197:23

Basic information

LNCipedia transcript ID: LINC01197:23 
LNCipedia gene ID: LINC01197
Ensembl Gene ID: ENSG00000273923
Ensembl Transcript ID: ENST00000616660
Location (hg38): chr15:95225326-95225864
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616660.1
Alternative gene names: ENSG00000273923.1; CTD-2536I1.3; ; AC104260.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -217.7355 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01197:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01197:23
4.1 LINC01197:23
5.0 LINC01197:23
5.1 LINC01197:23
5.2 LINC01197:23