Transcript: LINC01197:11

Basic information

LNCipedia transcript ID: LINC01197:11 
LNCipedia gene ID: LINC01197
Location (hg38): chr15:95255826-95327074
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 711 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023807; NONHSAT050190
Alternative gene names: XLOC_011592; linc-RGMA-7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.8049 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01197:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC016251.1-4:10
3.1 lnc-AC016251.1-8:10
4.0 LINC01197:11
4.1 LINC01197:11
5.0 LINC01197:11
5.1 LINC01197:11
5.2 LINC01197:11

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