Transcript: LINC01176:15

Basic information

LNCipedia transcript ID: LINC01176:15 
LNCipedia gene ID: LINC01176
Location (hg38): chr7:30390885-30404054
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 715 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_108081
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.9823 non-coding 
CPAT coding probability 9.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01176:15 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GARS-4:8
4.0 lnc-ZNRF2-4:5
4.1 lnc-ZNRF2-4:5
5.0 lnc-ZNRF2-4:5
5.1 LINC01176:6
5.2 LINC01176:15