Transcript: LINC01176:11

Basic information

LNCipedia transcript ID: LINC01176:11 
LNCipedia gene ID: LINC01176
Location (hg38): chr7:30384230-30412502
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5958 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT119864
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.5155 non-coding 
CPAT coding probability 12.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01176:11 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GARS-4:7
4.0 lnc-ZNRF2-4:1
4.1 lnc-ZNRF2-4:1
5.0 lnc-ZNRF2-4:1
5.1 LINC01176:2
5.2 LINC01176:11