Transcript: LINC01173:6

Basic information

LNCipedia transcript ID: LINC01173:6 
LNCipedia gene ID: LINC01173
Location (hg38): chr2:234682668-234723519
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047119.1|HBMT00000794726.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.7192 non-coding 
CPAT coding probability 3.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01173:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SH3BP4-3:3
5.0 lnc-SH3BP4-3:3
5.1 LINC01173:3
5.2 LINC01173:6