Transcript: LINC01169:3

Basic information

LNCipedia transcript ID: LINC01169:3 
LNCipedia gene ID: LINC01169
Location (hg38): chr15:66660222-66681776
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3051 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000511020; NONHSAT046810
Alternative gene names: ENSG00000250434; AC013564.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.6206 non-coding 
CPAT coding probability 13.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01169:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SMAD6-1:1
3.1 lnc-SMAD6-1:1
4.0 LINC01169:3
4.1 LINC01169:3
5.0 LINC01169:3
5.1 LINC01169:3
5.2 LINC01169:3