Transcript: LINC01128:58

Basic information

LNCipedia transcript ID: LINC01128:58 
LNCipedia gene ID: LINC01128
RefSeq ID: NR_047521
Location (hg38): chr1:827591-859446
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6623 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT000159; NR_047521; NR_047521.1
Alternative gene names: LINC01128


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.0955 non-coding 
CPAT coding probability 11.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01128:58 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL669831.1-3:4
4.0 lnc-AL669831.1-3:4
4.1 lnc-AL669831.1-3:4
5.0 lnc-AL669831.1-3:4
5.1 LINC01128:5
5.2 LINC01128:58