Transcript: LINC01093:3

Basic information

LNCipedia transcript ID: LINC01093:3 
LNCipedia gene ID: LINC01093
RefSeq ID: NR_039976
Location (hg38): chr4:184893000-184899461
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1516 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT099580; NR_039976; NR_039976.1
Alternative gene names: ; LINC01093


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.0875 non-coding 
CPAT coding probability 3.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01093:3 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSL1-2:12
4.0 LINC01093:3
4.1 LINC01093:3
5.0 LINC01093:3
5.1 LINC01093:3
5.2 LINC01093:3