Transcript: LINC01075:4

Basic information

LNCipedia transcript ID: LINC01075:4 
LNCipedia gene ID: LINC01075
Location (hg38): chr13:62224097-62249947
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 318 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00021559; ENST00000455977; ENST00000455977.1; RP11-168G22.1-001; OTTHUMT00000045189.1; NONHSAT034141
Alternative gene names: XLOC_010407; linc-C13orf34-18; ENSG00000230142; RP11-168G22.1; ENSG00000230142.1; OTTHUMG00000017017.1; LINC01075;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.9338 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01075:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-6:1
3.1 lnc-AL445989.1-7:1
4.0 LINC01075:4
4.1 LINC01075:4
5.0 LINC01075:4
5.1 LINC01075:4
5.2 LINC01075:4