Transcript: LINC01069:2

Basic information

LNCipedia transcript ID: LINC01069:2 
LNCipedia gene ID: LINC01069
RefSeq ID: NR_108076
Location (hg38): chr13:77979766-77994773
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2615 bp
Exons: 3
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00021518; NONHSAT034436; NR_108076; NR_108076.1
Alternative gene names: XLOC_010662; linc-EDNRB-1; ; LINC01069


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.8338 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01069:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EDNRB-2:2
3.1 lnc-EDNRB-2:2
4.0 LINC01069:2
4.1 LINC01069:2
5.0 LINC01069:2
5.1 LINC01069:2
5.2 LINC01069:2