Transcript: LINC01060:26

Basic information

LNCipedia transcript ID: LINC01060:26 
LNCipedia gene ID: LINC01060
Location (hg38): chr4:188455578-188541644
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 852 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249378.1|ENCT00000327465.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.4016 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01060:26 no no no no

Available literature

  1. Shi (2018), Loss of Linc01060 induces pancreatic cancer progression through vinculin-mediated focal adhesion turnover., Cancer Lett.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01060:26
5.0 LINC01060:26
5.1 LINC01060:26
5.2 LINC01060:26