Transcript: LINC01048:1

Basic information

LNCipedia transcript ID: LINC01048:1 
LNCipedia gene ID: LINC01048
RefSeq ID: NR_125762
Location (hg38): chr13:37481464-37484784
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 529 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125762; NR_125762.1
Alternative gene names: ; LINC01048


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.3128 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01048:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POSTN-1:2
4.0 LINC01048:1
4.1 LINC01048:1
5.0 LINC01048:1
5.1 LINC01048:1
5.2 LINC01048:1