Transcript: LINC01030:6

Basic information

LNCipedia transcript ID: LINC01030:6 
LNCipedia gene ID: LINC01030
Location (hg38): chr8:90534537-90554600
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015084; NONHSAT127652
Alternative gene names: XLOC_007149; linc-CALB1-2; TCONS_00015085


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.6809 non-coding 
CPAT coding probability 5.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01030:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM64-2:1
3.1 lnc-TMEM64-1:5
4.0 LINC01030:6
4.1 LINC01030:6
5.0 LINC01030:6
5.1 LINC01030:6
5.2 LINC01030:6