Transcript: LINC01019:5

Basic information

LNCipedia transcript ID: LINC01019:5 
LNCipedia gene ID: LINC01019
Location (hg38): chr5:3418774-3421261
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 734 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00010883
Alternative gene names: XLOC_004712; linc-IRX2-10;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.2411 non-coding 
CPAT coding probability 6.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01019:5 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRX2-4:5
3.1 lnc-IRX2-3:5
4.0 LINC01019:5
4.1 LINC01019:5
5.0 LINC01019:5
5.1 LINC01019:5
5.2 LINC01019:5