Transcript: LINC01018:6

Basic information

LNCipedia transcript ID: LINC01018:6 
LNCipedia gene ID: LINC01018
Location (hg38): chr5:6582491-6583804
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 313 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00010611
Alternative gene names: XLOC_004271; linc-SRD5A1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.6897 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01018:6 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SRD5A1-1:5
3.1 lnc-SRD5A1-1:5
4.0 LINC01018:6
4.1 LINC01018:6
5.0 LINC01018:6
5.1 LINC01018:6
5.2 LINC01018:6