Transcript: LINC01018:16

Basic information

LNCipedia transcript ID: LINC01018:16 
LNCipedia gene ID: LINC01018
Location (hg38): chr5:6586324-6587846
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 607 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009859; NONHSAT100206
Alternative gene names: XLOC_004271; linc-SRD5A1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.0468 non-coding 
CPAT coding probability 9.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01018:16 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SRD5A1-1:11
3.1 lnc-SRD5A1-1:11
4.0 LINC01018:16
4.1 LINC01018:16
5.0 LINC01018:16
5.1 LINC01018:16
5.2 LINC01018:16