Transcript: LINC01015:3

Basic information

LNCipedia transcript ID: LINC01015:3 
LNCipedia gene ID: LINC01015
RefSeq ID: NR_037181
Location (hg38): chr6:29529406-29533568
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1880 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108527; NR_037181; NR_037181.1
Alternative gene names: ; LINC01015


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.0755 non-coding 
CPAT coding probability 24.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01015:3 no no no no

Available literature

  1. Ha (2014), A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements., BMC Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR2H2-2:5
4.0 LINC01015:3
4.1 LINC01015:3
5.0 LINC01015:3
5.1 LINC01015:3
5.2 LINC01015:3