Transcript: LINC01013:10

Basic information

LNCipedia transcript ID: LINC01013:10 
HGNC Gene Symbol: LINC01013    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1013
Ensembl Gene ID: ENSG00000228495
Ensembl Transcript ID: ENST00000458028
Location (hg38): chr6:132133978-132147058
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1345 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458028; ENST00000458028.1; RP3-523C21.1-002; OTTHUMT00000042240.2; NONHSAT114952
Alternative gene names: ENSG00000228495; RP3-523C21.1; ENSG00000228495.1; OTTHUMG00000015574.3; LINC01013;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.493 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01013:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENPP1-3:10
3.1 lnc-ENPP1-4:8
4.0 LINC01013:10
4.1 LINC01013:10
5.0 LINC01013:10
5.1 LINC01013:10
5.2 LINC01013:10