Transcript: LINC00996:4

Basic information

LNCipedia transcript ID: LINC00996:4 
LNCipedia gene ID: LINC00996
Location (hg38): chr7:150433750-150446820
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 813 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00014233
Alternative gene names: XLOC_006293; linc-GIMAP8-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.1724 non-coding 
CPAT coding probability 28.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00996:4 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GIMAP8-1:4
3.1 lnc-GIMAP8-1:4
4.0 LINC00996:4
4.1 LINC00996:4
5.0 LINC00996:4
5.1 LINC00996:4
5.2 LINC00996:4