Transcript: LINC00992:2

Basic information

LNCipedia transcript ID: LINC00992:2 
HGNC Gene Symbol: LINC00992    
HGNC Full Gene Name: long intergenic non-protein coding RNA 992
Ensembl Gene ID: ENSG00000248663
Ensembl Transcript ID: ENST00000514186
Location (hg38): chr5:117415509-117546298
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 564 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000514186; ENST00000514186.1; CTC-504A5.1-001; OTTHUMT00000370938.1; NONHSAT103386; ENST00000514186.5
Alternative gene names: ENSG00000248663; CTC-504A5.1; ENSG00000248663.2; OTTHUMG00000162885.1; LINC00992; ENSG00000248663.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.5922 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00992:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COMMD10-4:1
3.1 lnc-COMMD10-5:1
4.0 LINC00992:2
4.1 LINC00992:2
5.0 LINC00992:2
5.1 LINC00992:2
5.2 LINC00992:2