Transcript: LINC00971:4

Basic information

LNCipedia transcript ID: LINC00971:4 
LNCipedia gene ID: LINC00971
RefSeq ID: NR_033860
Location (hg38): chr3:84638405-84869575
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7309 bp
Exons: 21
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT090649; NR_033860; NR_033860.1
Alternative gene names: ; LINC00971


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4637 non-coding 
CPAT coding probability 55.13% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00971:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VGLL3-6:4
4.0 LINC00971:4
4.1 LINC00971:4
5.0 LINC00971:4
5.1 LINC00971:4
5.2 LINC00971:4