Transcript: LINC00968:2

Basic information

LNCipedia transcript ID: LINC00968:2 
LNCipedia gene ID: LINC00968
Location (hg38): chr8:56518319-56559823
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2520 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT126708; NR_038236
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.7625 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00968:2 no no no no

Available literature

  1. Li (2018), Regulatory interactions between long noncoding RNA LINC00968 and miR-9-3p in non-small cell lung cancer: A bioinformatic analysis based on miRNA microarray, GEO and TCGA., Oncol Lett
  2. Wang (2018), Long non-coding RNA LINC00968 acts as oncogene in NSCLC by activating the Wnt signaling pathway., J. Cell. Physiol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PENK-2:14
4.0 LINC00968:2
4.1 LINC00968:2
5.0 LINC00968:2
5.1 LINC00968:2
5.2 LINC00968:2