Transcript: LINC00968:16

Basic information

LNCipedia transcript ID: LINC00968:16 
LNCipedia gene ID: LINC00968
RefSeq ID: NR_038236
Location (hg38): chr8:56518318-56559823
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2521 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038236.1
Alternative gene names: LINC00968


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -157.7625 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00968:16 no no no no

Available literature

  1. Li (2018), Regulatory interactions between long noncoding RNA LINC00968 and miR-9-3p in non-small cell lung cancer: A bioinformatic analysis based on miRNA microarray, GEO and TCGA., Oncol Lett
  2. Wang (2018), Long non-coding RNA LINC00968 acts as oncogene in NSCLC by activating the Wnt signaling pathway., J. Cell. Physiol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00968:16
5.1 LINC00968:16
5.2 LINC00968:16