Transcript: LINC00968:10

Basic information

LNCipedia transcript ID: LINC00968:10 
LNCipedia gene ID: LINC00968
Location (hg38): chr8:56518159-56559576
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2533 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015013; NONHSAT126707
Alternative gene names: XLOC_007087; linc-PENK-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.2727 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00968:10 no no no no

Available literature

  1. Li (2018), Regulatory interactions between long noncoding RNA LINC00968 and miR-9-3p in non-small cell lung cancer: A bioinformatic analysis based on miRNA microarray, GEO and TCGA., Oncol Lett
  2. Wang (2018), Long non-coding RNA LINC00968 acts as oncogene in NSCLC by activating the Wnt signaling pathway., J. Cell. Physiol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PENK-2:9
3.1 lnc-PENK-2:9
4.0 LINC00968:10
4.1 LINC00968:10
5.0 LINC00968:10
5.1 LINC00968:10
5.2 LINC00968:10