Transcript: LINC00967:3

Basic information

LNCipedia transcript ID: LINC00967:3 
HGNC Gene Symbol: LINC00967    
HGNC Full Gene Name: long intergenic non-protein coding RNA 967
Ensembl Gene ID: ENSG00000253138
Ensembl Transcript ID: ENST00000518035
Location (hg38): chr8:66192111-66197315
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1502 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518035.1; RP11-366K18.3-001; OTTHUMT00000378928.1; ENST00000518035.5
Alternative gene names: ENSG00000253138.1; RP11-366K18.3; OTTHUMG00000164475.1; LINC00967; ENSG00000253138.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.8576 non-coding 
CPAT coding probability 8.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00967:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM55-1:2
4.0 LINC00967:3
4.1 LINC00967:3
5.0 LINC00967:3
5.1 LINC00967:3
5.2 LINC00967:3