Transcript: LINC00938:4

Basic information

LNCipedia transcript ID: LINC00938:4 
LNCipedia gene ID: LINC00938
Ensembl Gene ID: ENSG00000273015
Ensembl Transcript ID: ENST00000609803
Location (hg38): chr12:45718046-45727775
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9730 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609803.2
Alternative gene names: ENSG00000273015.2; RP11-352M15.2; ; AC008124.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.8465 non-coding 
CPAT coding probability 20.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00938:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00938:4
4.1 LINC00938:4
5.0 LINC00938:4
5.1 LINC00938:4
5.2 LINC00938:4