Transcript: LINC00924:6

Basic information

LNCipedia transcript ID: LINC00924:6 
LNCipedia gene ID: LINC00924
RefSeq ID: NR_027133
Location (hg38): chr15:95433093-95507847
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2597 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT050203; NR_027133; NR_027133.1
Alternative gene names: ; LINC00924


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.76 non-coding 
CPAT coding probability 16.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00924:6 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR2F2-8:13
4.0 LINC00924:6
4.1 LINC00924:6
5.0 LINC00924:6
5.1 LINC00924:6
5.2 LINC00924:6