Transcript: LINC00908:2

Basic information

LNCipedia transcript ID: LINC00908:2 
HGNC Gene Symbol: LINC00908    
HGNC Full Gene Name: long intergenic non-protein coding RNA 908
Ensembl Gene ID: ENSG00000263812
Ensembl Transcript ID: ENST00000578613
Location (hg38): chr18:76528655-76559826
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2242 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000501504; TCONS_00026179; ENST00000578613.5
Alternative gene names: ENSG00000247544; XLOC_012726; linc-ZNF236-4; AC034110.1; ENSG00000263812.5; LINC00908;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.4843 non-coding 
CPAT coding probability 39.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00908:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-17M16.1.1-1:2
3.1 lnc-RP11-17M16.1.1-2:2
4.0 LINC00908:2
4.1 LINC00908:2
5.0 LINC00908:2
5.1 LINC00908:2
5.2 LINC00908:2