Transcript: LINC00903:1

Basic information

LNCipedia transcript ID: LINC00903:1 
HGNC Gene Symbol: LINC00903    
HGNC Full Gene Name: long intergenic non-protein coding RNA 903
Ensembl Gene ID: ENSG00000241397
Ensembl Transcript ID: ENST00000497854
Location (hg38): chr3:116552473-116568264
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 223 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005574; ENST00000497854.1; LSAMP-AS2-001; OTTHUMT00000354623.1; NONHSAT091311
Alternative gene names: XLOC_002767; linc-C3orf30-9; ENSG00000241397.1; LSAMP-AS2; OTTHUMG00000159325.1; LINC00903;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.9999 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00903:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GAP43-3:1
3.1 lnc-GAP43-5:1
4.0 LINC00903:1
4.1 LINC00903:1
5.0 LINC00903:1
5.1 LINC00903:1
5.2 LINC00903:1