Transcript: LINC00895:15

Basic information

LNCipedia transcript ID: LINC00895:15 
LNCipedia gene ID: LINC00895
Location (hg38): chr22:19550808-19556824
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2015 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029645; NONHSAT083414
Alternative gene names: XLOC_014297; linc-CLDN5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.8408 non-coding 
CPAT coding probability 63.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00895:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLDN5-1:5
3.1 lnc-CLDN5-1:5
4.0 lnc-CLDN5-1:5
4.1 lnc-CLDN5-1:5
5.0 lnc-CLDN5-1:5
5.1 LINC00895:8
5.2 LINC00895:15