Transcript: LINC00895:12

Basic information

LNCipedia transcript ID: LINC00895:12 
LNCipedia gene ID: LINC00895
Location (hg38): chr22:19551359-19566807
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1545 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029345; NONHSAT083415
Alternative gene names: XLOC_014297; linc-CLDN5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.8408 non-coding 
CPAT coding probability 6.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00895:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLDN5-1:2
3.1 lnc-CLDN5-1:2
4.0 lnc-CLDN5-1:2
4.1 lnc-CLDN5-1:2
5.0 lnc-CLDN5-1:2
5.1 LINC00895:5
5.2 LINC00895:12