Transcript: LINC00895:10

Basic information

LNCipedia transcript ID: LINC00895:10 
HGNC Gene Symbol: LINC00895    
HGNC Full Gene Name: long intergenic non-protein coding RNA 895
Ensembl Gene ID: ENSG00000281548
Ensembl Transcript ID: ENST00000629028
Location (hg38): chr22:19565203-19566839
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1637 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629028.1
Alternative gene names: ENSG00000281548.1; LINC00895


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.6995 non-coding 
CPAT coding probability 12.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00895:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CLDN5-1:7
4.1 lnc-CLDN5-1:7
5.0 lnc-CLDN5-1:7
5.1 LINC00895:3
5.2 LINC00895:10