Transcript: LINC00892:3

Basic information

LNCipedia transcript ID: LINC00892:3 
LNCipedia gene ID: LINC00892
RefSeq ID: NR_038461
Location (hg38): chrX:136639543-136642429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 689 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT138724; NR_038461; NR_038461.1
Alternative gene names: ; LINC00892


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.7572 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00892:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD40LG-1:7
4.0 LINC00892:3
4.1 LINC00892:3
5.0 LINC00892:3
5.1 LINC00892:3
5.2 LINC00892:3