Transcript: LINC00882:22

Basic information

LNCipedia transcript ID: LINC00882:22 
LNCipedia gene ID: LINC00882
Location (hg38): chr3:106894352-106895718
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1367 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT091004
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 74.7651 coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00882:22 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLB-7:30
4.0 LINC00882:22
4.1 LINC00882:22
5.0 LINC00882:22
5.1 LINC00882:22
5.2 LINC00882:22