Transcript: LINC00877:16

Basic information

LNCipedia transcript ID: LINC00877:16 
LNCipedia gene ID: LINC00877
Location (hg38): chr3:72036328-72060209
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 818 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT090432
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.0176 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00877:16 no no no no

Available literature

  1. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RYBP-4:15
4.0 LINC00877:16
4.1 LINC00877:16
5.0 LINC00877:16
5.1 LINC00877:16
5.2 LINC00877:16