Transcript: LINC00864:1

Basic information

LNCipedia transcript ID: LINC00864:1 
HGNC Gene Symbol: LINC00864    
HGNC Full Gene Name: long intergenic non-protein coding RNA 864
Ensembl Gene ID: ENSG00000228055
Ensembl Transcript ID: ENST00000447936
Location (hg38): chr10:87397062-87424792
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 511 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447936; ENST00000447936.1; RP11-399L7.2-002; OTTHUMT00000049217.1; NONHSAT015434
Alternative gene names: ENSG00000228055; RP11-399L7.2; ENSG00000228055.1; OTTHUMG00000018674.1; ENSG00000228055.2; LINC00864;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.5103 non-coding 
CPAT coding probability 8.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00864:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLUD1-2:1
3.1 lnc-GLUD1-5:1
4.0 LINC00864:1
4.1 LINC00864:1
5.0 LINC00864:1
5.1 LINC00864:1
5.2 LINC00864:1