Transcript: LINC00863:6

Basic information

LNCipedia transcript ID: LINC00863:6 
LNCipedia gene ID: LINC00863
Location (hg38): chr10:87342924-87355430
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 891 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000439559; ENST00000439559.1; RP11-322M19.2-001; OTTHUMT00000049215.1; NONHSAT015424
Alternative gene names: ENSG00000224914; RP11-322M19.2; ENSG00000224914.1; OTTHUMG00000018673.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.0238 non-coding 
CPAT coding probability 5.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00863:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM22D-1:1
3.1 lnc-FAM22D-1:1
4.0 LINC00863:6
4.1 LINC00863:6
5.0 LINC00863:6
5.1 LINC00863:6
5.2 LINC00863:6