Transcript: LINC00824:1

Basic information

LNCipedia transcript ID: LINC00824:1 
HGNC Gene Symbol: LINC00824    
HGNC Full Gene Name: long intergenic non-protein coding RNA 824
Ensembl Gene ID: ENSG00000254275
Ensembl Transcript ID: ENST00000518044
Location (hg38): chr8:128561006-128564679
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 572 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518044; ENST00000518044.1; RP11-89M16.1-001; OTTHUMT00000381577.1; NONHSAT129100
Alternative gene names: ENSG00000253466; RP11-89M16.1; ENSG00000254275.2; OTTHUMG00000165050.1; ENSG00000254275.6; LINC00824;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.3983 non-coding 
CPAT coding probability 1.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00824:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM75-2:1
3.1 lnc-TMEM75-2:1
4.0 LINC00824:1
4.1 LINC00824:1
5.0 LINC00824:1
5.1 LINC00824:1
5.2 LINC00824:1