Transcript: LINC00690:5

Basic information

LNCipedia transcript ID: LINC00690:5 
LNCipedia gene ID: LINC00690
Location (hg38): chr3:16536316-16538896
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 258 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006796; NONHSAT088525
Alternative gene names: XLOC_002588; linc-PLCL2-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.6801 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00690:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OXNAD1-2:4
3.1 lnc-OXNAD1-2:3
4.0 LINC00690:5
4.1 LINC00690:5
5.0 LINC00690:5
5.1 LINC00690:5
5.2 LINC00690:5