Transcript: LINC00690:1

Basic information

LNCipedia transcript ID: LINC00690:1 
LNCipedia gene ID: LINC00690
Location (hg38): chr3:16536303-16541389
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1544 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT088522; FPKM1_group_20888_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.6801 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00690:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OXNAD1-2:6
4.0 LINC00690:1
4.1 LINC00690:1
5.0 LINC00690:1
5.1 LINC00690:1
5.2 LINC00690:1