Transcript: LINC00677:1

Basic information

LNCipedia transcript ID: LINC00677:1 
HGNC Gene Symbol: LINC00677    
HGNC Full Gene Name: long intergenic non-protein coding RNA 677
Ensembl Gene ID: ENSG00000259717
Ensembl Transcript ID: ENST00000560742
Location (hg38): chr14:103120853-103123007
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 327 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT040134; ENST00000560742.1
Alternative gene names: ENSG00000259717.1; LINC00677;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.0191 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00677:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-736N17.6.1-3:1
4.0 LINC00677:1
4.1 LINC00677:1
5.0 LINC00677:1
5.1 LINC00677:1
5.2 LINC00677:1