Transcript: LINC00642:4

Basic information

LNCipedia transcript ID: LINC00642:4 
LNCipedia gene ID: LINC00642
RefSeq ID: NR_033986
Location (hg38): chr14:90455230-90458905
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 709 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT039224; NR_033986; NR_033986.1
Alternative gene names: ; LINC00642


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.8326 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00642:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALM1-1:12
4.0 LINC00642:4
4.1 LINC00642:4
5.0 LINC00642:4
5.1 LINC00642:4
5.2 LINC00642:4