Transcript: LINC00636:4

Basic information

LNCipedia transcript ID: LINC00636:4 
LNCipedia gene ID: LINC00636
Location (hg38): chr3:107883190-107937055
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9470 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000240423.1|MICT00000247625.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.5081 non-coding 
CPAT coding probability 13.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00636:4 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00636:4
5.0 LINC00636:4
5.1 LINC00636:4
5.2 LINC00636:4