Transcript: LINC00635:43

Basic information

LNCipedia transcript ID: LINC00635:43 
LNCipedia gene ID: LINC00635
Location (hg38): chr3:107855201-107878076
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 660 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241469.3|ENST00000608137.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.4095 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00635:43 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00635:43
5.0 LINC00635:43
5.1 LINC00635:43
5.2 LINC00635:43