Transcript: LINC00635:23

Basic information

LNCipedia transcript ID: LINC00635:23 
LNCipedia gene ID: LINC00635
RefSeq ID: NR_024276
Location (hg38): chr3:107841662-107878068
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1189 bp
Exons: 8
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024276; NR_024276.1
Alternative gene names: ; LINC00635


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.8171 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00635:23 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD47-2:27
4.0 LINC00635:23
4.1 LINC00635:23
5.0 LINC00635:23
5.1 LINC00635:23
5.2 LINC00635:23