Transcript: LINC00612:7

Basic information

LNCipedia transcript ID: LINC00612:7 
LNCipedia gene ID: LINC00612
Location (hg38): chr12:9055586-9065079
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2222 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214851.4|ENST00000538094.1
Alternative gene names: MGC40170; FLJ41814


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 179.5637 coding 
CPAT coding probability 75.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00612:7 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00612:7
5.0 LINC00612:7
5.1 LINC00612:7
5.2 LINC00612:7

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