Transcript: LINC00607:5

Basic information

LNCipedia transcript ID: LINC00607:5 
HGNC Gene Symbol: LINC00607    
HGNC Full Gene Name: long intergenic non-protein coding RNA 607
Ensembl Gene ID: ENSG00000235770
Ensembl Transcript ID: ENST00000413563
Location (hg38): chr2:215624123-215827441
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413563.1; LINC00607-004; OTTHUMT00000337317.1; NONHSAT076773; ENST00000413563.5
Alternative gene names: ENSG00000235770.1; LINC00607; OTTHUMG00000154834.1; ENSG00000235770.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -179.9802 non-coding 
CPAT coding probability 20.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00607:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FN1-3:4
4.0 LINC00607:5
4.1 LINC00607:5
5.0 LINC00607:5
5.1 LINC00607:5
5.2 LINC00607:5