Transcript: LINC00599:21

Basic information

LNCipedia transcript ID: LINC00599:21 
LNCipedia gene ID: LINC00599
Location (hg38): chr8:9903461-9905367
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 717 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253230.2|ENST00000521242.1
Alternative gene names: Rncr3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.6111 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00599:21 no no no no

Available literature

  1. Shan (2016), Role of long non-coding RNA-RNCR3 in atherosclerosis-related vascular dysfunction., Cell Death Dis
  2. Mercer (2010), Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation., BMC Neurosci
  3. Cunningham (1997), Pulmonary agenesis: a predictor of ipsilateral malformations., Am. J. Med. Genet.
  4. Yu (1997), Large-scale concatenation cDNA sequencing., Genome Res.
  5. Andersson (1996), A "double adaptor" method for improved shotgun library construction., Anal. Biochem.
  6. Tsugaya (1991), A new technique of ureteric catheterization., Eur. Urol.
  7. Lilienthal (1965), An epidemiological study of chronic periodontal disease., Arch. Oral Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00599:21
5.0 LINC00599:21
5.1 LINC00599:21
5.2 LINC00599:21