Transcript: LINC00574:2

Basic information

LNCipedia transcript ID: LINC00574:2 
LNCipedia gene ID: LINC00574
RefSeq ID: NR_026780
Location (hg38): chr6:169790073-169802873
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2566 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT116230; NR_026780; NR_026780.1
Alternative gene names: FLJ13162; dJ182D15.1; LINC00574


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.8509 non-coding 
CPAT coding probability 13.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00574:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf70-1:3
4.0 LINC00574:2
4.1 LINC00574:2
5.0 LINC00574:2
5.1 LINC00574:2
5.2 LINC00574:2